Skip to content

Course Material

Find Our Material on Github!

All our materials are located in a GitHub repository, located here.

Day One - Wednesday 13 Feb:

Day Two - Thursday 14 Feb:

Day Three - Friday 15 Feb:

Day Four - Saturday 16 Feb:

  • Starting Point
    • Rscripts and folder structure for MRW replication
  • Where we ended the day
    • Adds a Snakefile to above to generate all tables and graphs
    • In class, Lachlan broke the rule to create a table, this fixes it
  • Extended version
    • Split Snakefiles into multiple subworkflows
    • Packrat for version management
    • Builds pdf of a paper and slides
  • Notes (A Work in Progress tutorial)